BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B08LP1|AL425643
(728 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1570 1439 0.0
>3x_Contig1570
Length = 12233
Score = 1439 bits (726), Expect = 0.0
Identities = 726/726 (100%)
Strand = Plus / Plus
Query: 3 atccataatatcgatgtgtaaccaatcggcaccagagttaatcacattgtgacattcaca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3519 atccataatatcgatgtgtaaccaatcggcaccagagttaatcacattgtgacattcaca 3578
Query: 63 acctaatttagtgaaatcactggctagaatagatggggcaataatagcacgaaccatgtt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3579 acctaatttagtgaaatcactggctagaatagatggggcaataatagcacgaaccatgtt 3638
Query: 123 aaaattgaaacttattatagttttgtaaactgctgaccttaaactcgaacaggtaatggt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3639 aaaattgaaacttattatagttttgtaaactgctgaccttaaactcgaacaggtaatggt 3698
Query: 183 aaatcgtattctataatgagcagagcagaccgttaattgggtagttggttcttgtttgaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 aaatcgtattctataatgagcagagcagaccgttaattgggtagttggttcttgtttgaa 3758
Query: 243 aagaattccctgctgctttttctaattttattgcattctttataaaactgaaattctgat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3759 aagaattccctgctgctttttctaattttattgcattctttataaaactgaaattctgat 3818
Query: 303 atccaaagaaagcgactattgagagaaagaagaggggatcaggattacttcagagtattt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 atccaaagaaagcgactattgagagaaagaagaggggatcaggattacttcagagtattt 3878
Query: 363 tacagctcaagattcattatataatgtaccgttgatatcaggagtgctttattccgagtt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 tacagctcaagattcattatataatgtaccgttgatatcaggagtgctttattccgagtt 3938
Query: 423 tttttaccaggaattggtacgatttagtcctttgaattggcatacggttgcagtatttgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3939 tttttaccaggaattggtacgatttagtcctttgaattggcatacggttgcagtatttgc 3998
Query: 483 atgcttccgtgatctattttaatatgtaaggaatatataagaagagcattttttagccag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3999 atgcttccgtgatctattttaatatgtaaggaatatataagaagagcattttttagccag 4058
Query: 543 aaaattttctttcagtaggaaacgtaacagcttggaacatctgatcgtagaggtagtggg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4059 aaaattttctttcagtaggaaacgtaacagcttggaacatctgatcgtagaggtagtggg 4118
Query: 603 ctatttgtgatacttggagtgttgcagcaggatatttgaactacattagctgtatacatt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4119 ctatttgtgatacttggagtgttgcagcaggatatttgaactacattagctgtatacatt 4178
Query: 663 tgagtgtatttggcaaaatagtaaggatcacatcataaaaatgtccaaccctatcaagac 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4179 tgagtgtatttggcaaaatagtaaggatcacatcataaaaatgtccaaccctatcaagac 4238
Query: 723 atcgag 728
||||||
Sbjct: 4239 atcgag 4244
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5740
Number of Sequences: 1807
Number of extensions: 5740
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 728
length of database: 10,358,551
effective HSP length: 16
effective length of query: 712
effective length of database: 10,329,639
effective search space: 7354702968
effective search space used: 7354702968
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)